Hanbo Chen, Hang Xiao, Tianming Liu, Hanchuan Peng, SmartTracing: Self-learning based Neuron Reconstruction, Brain Informatics, 2015. vol. 2(3), pp. 135-144.

Hanbo Chen, Tao Liu, Yu Zhao, Tuo Zhang, Yujie Li, Meng Li, Hongmiao Zhang, Hui Kuang, Lei Guo, Joe Tsien, Tianming Liu, Optimization of Large-scale Mouse Brain Connectome via Joint Evaluation of DTI and Neuron Tracing Data, NeuroImage, 2015. vol. 115, pp. 202-213.

Tuo Zhang*, Hanbo Chen*, Lei Guo, Kaiming Li, Longchuan Li, Shu Zhang, Dinggang Shen, Xiaoping Hu**, Tianming Liu**, Characterization of U-shape Streamline Fibers: Methods and Applications, Medical Image Analysis, 2014. vol. 18(5), pp. 795-807. *Joint first authors, **Joint corresponding authors.

Hanbo Chen, Kaiming Li, Dajiang Zhu, Xi Jiang, Yixuan Yuan, Peili Lv, Tuo Zhang, Lei Guo, Dinggang Shen*, Tianming Liu*. Inferring Group-wise Consistent Multimodal Brain Networks via Multi-view Spectral Clustering, IEEE Transactions on Medical Imaging, 2013. vol. 32(9), pp. 1576 - 1586. *Joint corresponding authors.

Hanbo Chen*, Tuo Zhang*, Lei Guo, Kaiming Li, Xiang Yu, Longchuan Li, Xintao Hu, Junwei Han, Xiaoping Hu**, Tianming Liu**, Coevolution of Gyral Folding and Structural Connection Patterns in Primate Brains, Cerebral Cortex, 2013. vol. 23(5), pp. 1208-1217. *Joint First Authors, **Co-corresponding Authors.

Hanbo Chen*, Armin Iraji*, Xi Jiang, Jinglei Lv, Zhifeng Kou**, Tianming Liu**, Longitudinal Analysis of Brain Recovery After Mild Traumatic Brain Injury Based on Groupwise Consistent Brain Network Clusters, MICCAI 2015, LNCS, vol. 9350, pp. 194-201. *Co-first authors; **Joint corresponding authors.

Yue Yuan*, Hanbo Chen*, Jianfeng Lu, Tuo Zhang, Tianming Liu, Distance Networks for Morphological Profiling and Characterization of DICCCOL Landmarks, MICCAI 2015, LNCS, vol. 9350, pp. 380-387. *Co-first authors.

Hanbo Chen, Yu Zhao, Tuo Zhang, Hongmiao Zhang, Hui Kuang, Meng Li, Joe Z. Tsien, Tianming Liu, Construct and Assess Multimodal Mouse Brain Connectomes via Joint Modeling of Multi-scale DTI and Neuron Tracer Data, MICCAI 2014, LNCS, vol. 8675, pp. 273-280.

Hanbo Chen, Kaiming Li, Dajiang Zhu, Lei Guo, Tianming Liu. Group-wise Optimization and Individualized Prediction of Structural Connectomes, ISBI 2014, pp. 742-745.

Hanbo Chen*, Xiang Yu*, Xi Jiang, Kaiming Li, Longchuan Li, Xintao Hu, Junwei Han, Lei Guo, Xiaoping Hu**, Tianming Liu**. Evolutionarily-preserved Consistent Gyral Folding Patterns Across Primate Brains, ISBI 2014, pp. 1218-1221. *Co-first authors; **Joint corresponding authors.

Hanbo Chen, Tuo Zhang, Tianming Liu. Identifying Group-wise Consistent White Matter Landmarks via Novel Fiber Shape Descriptor, MICCAI 2013, LNCS, vol. 8149, pp. 66-73.(Oral, 5%)

Hanbo Chen, Kaiming Li, Dajiang Zhu, Tianming Liu. Identifying Consistent Brain Networks via Maximizing Predictability of Functional Connectome from Structural Connectome, ISBI 2013. pp. 978-981.

Xiang Yu*, Hanbo Chen*, Tuo Zhang, Xintao Hu, Lei Guo, Tianming Liu. Joint Analysis of Gyral Folding and Fiber Shape Patterns, ISBI 2013. pp. 85 - 88. *Joint First Author.

Hanbo Chen, Kaiming Li, Dajiang Zhu, Tuo Zhang, Changfeng Jin, Lei Guo, Lingjiang Li, Tianming Liu. Inferring Group-wise Consistent Multimodal Brain Networks via Multi-view Spectral Clustering, MICCAI 2012, LNCS, vol. 7512, pp. 297-304.

Hanbo Chen, Xiao Cai, Dajiang Zhu, Feiping Nie, Tianming Liu, Heng Huang. Group-wise Consistent Parcellation of Gyri via Adaptive Multi-view Spectral Clustering of Fiber Shapes, MICCAI 2012, LNCS, vol. 7511, pp. 271-279.

Hanbo Chen, Lei Guo, Kaiming Li, Xintao Hu, Tianming Liu. Assessment of Regularity and Variability of Cortical Folding Patterns of Working Memory ROIs, MICCAI 2011, LNCS, vol. 6892, pp. 318-326.

Hanbo Chen, Lei Guo, Jingxin Nie, Tuo Zhang, Xintao Hu, Tianming Liu. A dynamic skull model for simulation of cerebral cortex folding, MICCAI 2010, LNCS, vol. 6362, pp. 412-419.

NeuronStitcher: A Suite for Stitching Neuron Fragments in Serial 3D Sections, SfN, 2015.

Group-wise Optimization and Individualized Prediction of Structural Connectomes, OHBM, 2013.

Inferring Group-wise Consistent Multimodal Brain Networks via Multi-view Spectral Clustering, OHBM, 2013.

Armin Iraji, Hanbo Chen, Natalie Wiseman, E. Mark Haacke, Tianming Liu, Zhifeng Kou, Compensation through Functional Hyperconnectivity: A Longitudinal Connectome Assessment of Mild Traumatic Brain Injury, Neural Plasticity, 2015. in press

Tuo Zhang, Hanbo Chen, Lei Guo, Kaiming Li, Longchuan Li, Shu Zhang, Dinggang Shen, Xiaoping Hu, Tianming Liu, Characterization of U-shape Streamline Fibers: Methods and Applications. Medical Image Analysis, 2014. vol. 18(5), pp. 795-807.

Tao Zeng, Hanbo Chen, Ahmed Fakhry, Xiaoping Hu, Tianming Liu*, Shuiwang Ji*, Allen Mouse Brain Atlases Reveal Different Neural Connection and Gene Expression Patterns in Cerebellum Gyri and Sulci, Brain Structure and Function, 2015. vol. 220(5), pp. 2691-703. *Joint-correspondence authors.

Xin Zhang, Lei Guo, Xiang Li, Tuo Zhang, Dajiang Zhu, Kaiming Li, Hanbo Chen, Jinglei Lv, Changfeng Jin, Qun Zhao, Lingjiang Li, Tianming Liu. Characterization of Task-free and Task-performance Brain States via Functional Connectome Patterns, Medical Image Analysis, 2013. vol. 17(8), pp. 1106–1122.

Yixuan Yuan, Xi Jiang, Dajiang Zhu, Hanbo Chen, Kaiming Li, Peili Lv, Xiang Yu, Xiaojin Li, Shu Zhang, Tuo Zhang, Xintao Hu, Junwei Han, Lei Guo, Tianming Liu, Meta-analysis of Functional Roles of DICCCOLs, Neuroinformatics, 2013. vol. 11(1), pp. 47-63.

Degang Zhang, Lei Guo, Dajiang Zhu, Kaiming Li, Longchuan Li, Hanbo Chen, Qun Zhao, Xiaoping Hu**, and Tianming Liu**, Diffusion Tensor Imaging Reveals Evolution of Primate Brain Architectures, accpeted, Brain Structure and Function, 2012. **Joint corresponding authors.

Kaiming Li, Lei Guo, Carlos Faraco, Dajiang Zhu, Hanbo Chen, Yixuan Yuan, Jinglei Lv, Fan Deng, Xi Jiang, Tuo Zhang, Xintao Hu, Degang Zhang, Lloyd Miller, Tianming Liu, Visual Analytics of Brain Networks, NeuroImage, 2012. vol. 61(1), pp. 82–97.

Dajiang Zhu*, Kaiming Li*, Lei Guo, Xi Jiang, Tuo Zhang, Degang Zhang, Hanbo Chen, Fan Deng, Carlos Faraco, Changfeng Jin, Chong-Yaw Wee, Yixuan Yuan, Peili Lv, Yan Yin, Xiaolei Hu, Lian Duan, Xintao Hu, Junwei Han, Lihong Wang, Dinggang Shen, L Stephen Miller, Lingjiang Li, Tianming Liu, DICCCOL: Dense Individualized and Common Connectivity-based Cortical Landmarks, *Joint first authors, Cerebral Cortex, 2013. vol. 23(4), pp. 786-800.

Jingxin Nie, Lei Guo, Kaiming Li, Yonghua Wang, Guojun Chen, Longchuan Li, Hanbo Chen, Fan Deng, Xi Jiang, Tuo Zhang, Ling Huang, Carlos Faraco, Degang Zhang, Cong Guo, Pew-Thian Yap, Xintao Hu, Gang Li, Jinglei Lv, Yixuan Yuan, Dajiang Zhu, Junwei Han, Dean Sabatinelli, Qun Zhao, L Stephen Miller, Bingqian Xu, Ping Shen, Simon Platt, Dinggang Shen, Xiaoping Hu, Tianming Liu, Axonal Fiber Terminations Concentrate on Gyri, Cerebral Cortex, 2012. vol. 22(12), pp. 2831-2839.

Dajiang Zhu, Kaiming Li, Carlos Faraco, Fan Deng, Degang Zhang, Xi Jiang, Hanbo Chen, Lei Guo, Stephen Miller, Tianming Liu, Optimization of Functional Brain ROIs via Maximization of Consistency of Structural Connectivity Profiles, NeuroImage, 2012. vol. 59(2), pp. 1382–1393.