package fda
The fda
package contains classes, traits and objects for
Functional Data Analysis (FDA).
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Type Members
-
class
KMeansClustering_F extends Clusterer
The
KMeansClustering_F
class provides a simple form of k-means clustering that simply smoothes the data and then appliersKMeansClustering
. -
class
PrincipalComponents_F extends Reducer
The
PrincipalComponents_F
class performs the Principal Component Analysis 'PCA' on data matrix 'x'.The
PrincipalComponents_F
class performs the Principal Component Analysis 'PCA' on data matrix 'x'. It can be used to reduce the dimensionality of the data. First find the Principal Components 'PC's by calling 'findPCs' and then call 'reduce' to reduce the data (i.e., reduce matrix 'x' to a lower dimensionality matrix). -
class
PrincipalDiff extends AnyRef
The
PrincipalDiff
class uses Principal Differential Analysis (PDA) to fit functional data from a process governed by an Ordinary Differential Equation (ODE).The
PrincipalDiff
class uses Principal Differential Analysis (PDA) to fit functional data from a process governed by an Ordinary Differential Equation (ODE). FIX - TBD -
class
Regression_F extends AnyRef
The
Regression_F
class performs functional linear regression.The
Regression_F
class performs functional linear regression.y = b0 + b1 * x(t) + ε
-
class
Regression_F2S extends Predictor
The
Regression_F2S
class performs functional linear regression with scaler response and functional covariates.The
Regression_F2S
class performs functional linear regression with scaler response and functional covariates.y = a + <b(t),x(t)> + ε
where
<b, x>
denotes the inner product ofb
andx
. -
class
SmoothingB_F extends Error
The
SmoothingB_F
class fits a time-dependent data vector 'y' to B-Splines.The
SmoothingB_F
class fits a time-dependent data vector 'y' to B-Splines.y(t(i)) = x(t(i)) + ε(t(i)) x(t) = cΦ(t)
where 'x' is the signal, 'ε' is the noise, 'c' is a coefficient vector and 'Φ(t)' is a vector of basis functions. This version just used B-Splines.
-
class
Smoothing_F extends Error
The
Smoothing_F
class fits a time-dependent data vector 'y' to B-Splines.The
Smoothing_F
class fits a time-dependent data vector 'y' to B-Splines.y(t(i)) = x(t(i)) + ε(t(i)) x(t) = cΦ(t)
where 'x' is the signal, 'ε' is the noise, 'c' is a coefficient vector and 'Φ(t)' is a vector of basis functions.
-
class
StatFunction extends AnyRef
The
StatFunction
class takes an array of functions 'xa' and provides an 'apply' method for evaluating these functions at time 't' to produce a vector from which statistics can be computed.The
StatFunction
class takes an array of functions 'xa' and provides an 'apply' method for evaluating these functions at time 't' to produce a vector from which statistics can be computed. Each function represents an experimental replication.
Value Members
-
object
KMeansClustering_FTest extends App
The
KMeansClustering_FTest
object is used to test theKMeansClustering_F
class.The
KMeansClustering_FTest
object is used to test theKMeansClustering_F
class. > runMain scalation.analytics.fda.KMeansClustering_FTest -
object
PrincipalComponents_FTest extends App
The
PrincipalComponents_FTest
object is used to test thePrincipalComponents_F
class.The
PrincipalComponents_FTest
object is used to test thePrincipalComponents_F
class.- See also
www.ce.yildiz.edu.tr/personal/songul/file/1097/principal_components.pdf > runMain scalation.analytics.PrincipalComponents_FTest
-
object
PrincipalDiffTest extends App
The
PrincipalDiffTest
object is used to test thePrincipalDiff
class.The
PrincipalDiffTest
object is used to test thePrincipalDiff
class. > runMain scalation.analytics.fda.PrincipalDiffTest FIX - smoothing not working correctly -
object
Regression_F2STest extends App
The
Regression_F2STest
object is used to test theRegression_F2S
class.The
Regression_F2STest
object is used to test theRegression_F2S
class. > runMain scalation.analytics.fda.Regression_F2STest -
object
Regression_FTest extends App
The
Regression_FTest
object is used to test theRegression_F
class.The
Regression_FTest
object is used to test theRegression_F
class. > runMain scalation.analytics.fda.Regression_FTest -
object
Regression_FTest2 extends App
The
Regression_FTest2
object is used to test theRegression_F
class.The
Regression_FTest2
object is used to test theRegression_F
class. > runMain scalation.analytics.fda.Regression_FTest2 -
object
SmoothingB_FTest extends App
The
SmoothingB_FTest
is used to test theSmoothingB_F
class.The
SmoothingB_FTest
is used to test theSmoothingB_F
class. > runMain scalation.analytics.fda.SmoothingB_FTest -
object
SmoothingMethod extends Enumeration
The
SmoothingMethod
object provides enumerations defining various smoothing methods -
object
Smoothing_FTest extends App
The
Smoothing_FTest
is used to test theSmoothing_F
class.The
Smoothing_FTest
is used to test theSmoothing_F
class. > runMain scalation.analytics.fda.Smoothing_FTest -
object
StatFunction
The
StatFunction
companion object extends statistics vector operations to matrices.The
StatFunction
companion object extends statistics vector operations to matrices. TheStatFunction
object/class is the functional analog to theStatVector
object/class. -
object
StatFunctionTest extends App
The
StatFunctionTest
object is used to test theStatFunction
class.The
StatFunctionTest
object is used to test theStatFunction
class. > runMain scalation.analytics.fda.StatFunctionTest -
object
StatFunctionTest2 extends App
The
StatFunctionTest2
object is used to test theStatFunction
object.The
StatFunctionTest2
object is used to test theStatFunction
object. > runMain scalation.analytics.fda.StatFunctionTest2