class ExpRegression extends PredictorMat
The ExpRegression class supports exponential regression. In this case,
'x' is multi-dimensional [1, x_1, ... x_k]. Fit the parameter vector 'b' in the
exponential regression equation
log (mu (x)) = b dot x = b_0 + b_1 * x_1 + ... b_k * x_k
- See also
www.stat.uni-muenchen.de/~leiten/Lehre/Material/GLM_0708/chapterGLM.pdf
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Instance Constructors
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new
ExpRegression(x: MatriD, y: VectoD, nonneg: Boolean = true)
- x
the data/design matrix
- y
the response vector
- nonneg
whether to check that responses are nonnegative
Value Members
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final
def
!=(arg0: Any): Boolean
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final
def
##(): Int
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final
def
==(arg0: Any): Boolean
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final
def
asInstanceOf[T0]: T0
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val
b: VectoD
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- protected
- Definition Classes
- Predictor
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def
clone(): AnyRef
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def
coefficient: VectoD
Return the vector of coefficient/parameter values.
Return the vector of coefficient/parameter values.
- Definition Classes
- Predictor
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def
crossVal(k: Int = 10): Unit
Perform 'k'-fold cross-validation.
Perform 'k'-fold cross-validation.
- k
the number of folds
- Definition Classes
- ExpRegression → PredictorMat
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def
crossValidate(algor: (MatriD, VectoD) ⇒ PredictorMat, k: Int = 10): Array[Statistic]
- Definition Classes
- PredictorMat
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val
df: (Double, Double)
- Definition Classes
- Fit
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def
diagnose(e: VectoD, w: VectoD = null, yp: VectoD = null): Unit
Given the error/residual vector, compute the quality of fit measures.
Given the error/residual vector, compute the quality of fit measures.
- e
the corresponding m-dimensional error vector (y - yp)
- w
the weights on the instances
- yp
the predicted response vector (x * b)
- Definition Classes
- Fit
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val
e: VectoD
- Attributes
- protected
- Definition Classes
- Predictor
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final
def
eq(arg0: AnyRef): Boolean
- Definition Classes
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def
equals(arg0: Any): Boolean
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def
eval(xx: MatriD, yy: VectoD): Unit
Compute the error and useful diagnostics for the test dataset.
Compute the error and useful diagnostics for the test dataset.
- xx
the test data matrix
- yy
the test response vector
- Definition Classes
- PredictorMat → Predictor
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def
eval(): Unit
Compute the error and useful diagnostics for the entire dataset.
Compute the error and useful diagnostics for the entire dataset.
- Definition Classes
- PredictorMat → Predictor
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def
f_(z: Double): String
Format a double value.
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def
finalize(): Unit
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def
fit: VectoD
Return the quality of fit including 'sst', 'sse', 'mse0', rmse', 'mae', 'rSq', 'df._2', 'rBarSq', 'fStat', 'aic', 'bic'.
Return the quality of fit including 'sst', 'sse', 'mse0', rmse', 'mae', 'rSq', 'df._2', 'rBarSq', 'fStat', 'aic', 'bic'. Note, if 'sse > sst', the model introduces errors and the 'rSq' may be negative, otherwise, R^2 ('rSq') ranges from 0 (weak) to 1 (strong). Note that 'rSq' is the number 5 measure. Override to add more quality of fit measures.
- Definition Classes
- Fit
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def
fitLabel: Seq[String]
Return the labels for the quality of fit measures.
Return the labels for the quality of fit measures. Override to add more quality of fit measures.
- Definition Classes
- Fit
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def
fitMap: Map[String, String]
Build a map of quality of fit measures (use of
LinedHashMapmakes it ordered).Build a map of quality of fit measures (use of
LinedHashMapmakes it ordered). Override to add more quality of fit measures.- Definition Classes
- Fit
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final
def
flaw(method: String, message: String): Unit
- Definition Classes
- Error
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final
def
getClass(): Class[_]
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def
hashCode(): Int
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val
index_rSq: Int
- Definition Classes
- Fit
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final
def
isInstanceOf[T0]: Boolean
- Definition Classes
- Any
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val
k: Int
- Attributes
- protected
- Definition Classes
- PredictorMat
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def
ll(b: VectoD): Double
For a given parameter vector b, compute '-2 * Log-Likelihood' (-2LL).
For a given parameter vector b, compute '-2 * Log-Likelihood' (-2LL). '-2LL' is the standard measure that follows a Chi-Square distribution.
- b
the parameters to fit
- See also
www.statisticalhorizons.com/wp-content/uploads/Allison.StatComp.pdf
www.stat.cmu.edu/~cshalizi/350/lectures/26/lecture-26.pdf
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def
ll_null(b: VectoD): Double
For a given parameter vector b, compute '-2 * Log-Likelihood' (-2LL) for the null model (the one that does not consider the effects of x(i)).
For a given parameter vector b, compute '-2 * Log-Likelihood' (-2LL) for the null model (the one that does not consider the effects of x(i)).
- b
the parameters to fit
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val
m: Int
- Attributes
- protected
- Definition Classes
- PredictorMat
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def
mse_: Double
Return the mean of squares for error (sse / df._2).
Return the mean of squares for error (sse / df._2). Must call diagnose first.
- Definition Classes
- Fit
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final
def
ne(arg0: AnyRef): Boolean
- Definition Classes
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final
def
notify(): Unit
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final
def
notifyAll(): Unit
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def
predict(z: MatriD): VectoD
Predict the value of 'y = f(z)' by evaluating the formula 'y = b dot z', for each row of matrix 'z'.
Predict the value of 'y = f(z)' by evaluating the formula 'y = b dot z', for each row of matrix 'z'.
- z
the new matrix to predict
- Definition Classes
- PredictorMat
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def
predict(z: VectoD): Double
Predict the value of 'y = f(z)' by evaluating the formula 'y = b dot z', e.g., '(b_0, b_1, b_2) dot (1, z_1, z_2)'.
Predict the value of 'y = f(z)' by evaluating the formula 'y = b dot z', e.g., '(b_0, b_1, b_2) dot (1, z_1, z_2)'.
- z
the new vector to predict
- Definition Classes
- PredictorMat → Predictor
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def
predict(z: VectoI): Double
Given a new discrete data vector z, predict the y-value of f(z).
Given a new discrete data vector z, predict the y-value of f(z).
- z
the vector to use for prediction
- Definition Classes
- Predictor
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def
residual: VectoD
Return the vector of residuals/errors.
Return the vector of residuals/errors.
- Definition Classes
- Predictor
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def
sumCoeff(b: VectoD, stdErr: VectoD = null): String
Produce the summary report portion for the cofficients.
Produce the summary report portion for the cofficients.
- b
the parameters/coefficients for the model
- Definition Classes
- Fit
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def
summary(): Unit
Compute diagostics for the regression model.
Compute diagostics for the regression model.
- Definition Classes
- PredictorMat
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def
summary(b: VectoD, stdErr: VectoD = null): String
Produce a summary report with diagnostics for each predictor 'x_j' and the overall quality of fit.
Produce a summary report with diagnostics for each predictor 'x_j' and the overall quality of fit.
- b
the parameters/coefficients for the model
- Definition Classes
- Fit
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final
def
synchronized[T0](arg0: ⇒ T0): T0
- Definition Classes
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def
toString(): String
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def
train(yy: VectoD = y): ExpRegression
Train the predictor by fitting the parameter vector (b-vector) in the exponential regression equation.
Train the predictor by fitting the parameter vector (b-vector) in the exponential regression equation.
- yy
the response vector
- Definition Classes
- ExpRegression → PredictorMat → Predictor
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def
train(): PredictorMat
Given a set of data vectors 'x's and their corresponding responses 'y's, passed into the implementing class, train the prediction function 'y = f(x)' by fitting its parameters.
Given a set of data vectors 'x's and their corresponding responses 'y's, passed into the implementing class, train the prediction function 'y = f(x)' by fitting its parameters.
- Definition Classes
- PredictorMat
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def
train_null(): Unit
For the null model, train the classifier by fitting the parameter vector (b-vector) in the logistic regression equation using maximum likelihood.
For the null model, train the classifier by fitting the parameter vector (b-vector) in the logistic regression equation using maximum likelihood. Do this by minimizing -2l.
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final
def
wait(): Unit
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final
def
wait(arg0: Long, arg1: Int): Unit
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final
def
wait(arg0: Long): Unit
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val
x: MatriD
- Attributes
- protected
- Definition Classes
- PredictorMat
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val
y: VectoD
- Attributes
- protected
- Definition Classes
- PredictorMat